We construct an explicit Gröbner–Shirshov basis for free associative Rota–Baxter algebras of weight zero with nilpotent operator , where . First, we define a monomial order on the standard linear basis of the free algebra and establish fundamental identities for Rota–Baxter operators. For the case , the basis consists of the Rota–Baxter relation and the nilpotency relation . For general , we prove that the Gröbner–Shirshov basis is finite and consists of six families of relations – derived from resolving all composition ambiguities. Using the Composition-Diamond Lemma, we describe the corresponding irreducible basis , which provides normal forms for elements in the quotient algebra. This result gives a complete solution to the word problem for nilpotent Rota–Baxter algebras and establishes their operadic Gröbner–Shirshov basis.

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