We compute the complex, long-distance two-photon-exchange amplitude which contributes to the rare decay from lattice QCD. We use a physical-pion-mass gauge field ensemble at an inverse lattice spacing of GeV and a QED-based formalism. Our implementation strategies for all five non-SU-flavor-suppressed diagram topologies are given in detail. We achieve a 25% statistical precision on the dispersive part of this long-distance amplitude. This calculation is carried out with 2+1 quark flavors and therefore requires the addition of counter terms to compensate for the absence of the Glashow-Iliopoulos-Maiani mechanism. These counter terms are not included in the current calculation and will be the subject of a second paper. The precision of our results is limited by the reconstruction of the physical contribution of the intermediate state, for which various strategies are tested and compared.

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