In this paper, we propose a matrix-based polyalphabetic data encoding and decoding scheme using Fibonacci, Leonardo, Jacobsthal, and Lucas sequences. The method employs three sequence-based alphabets for character substitution and a Lucas-based auxiliary alphabet for word separators. A position-dependent selector, distributes repeated plaintext symbols among different numerical alphabets, thereby reducing frequency concentration. The resulting numerical matrix is divided into blocks and transformed using powers of the Leonardo -matrix with block-dependent keys generated from pre-shared parameters . A collision-free public prime is used to keep ciphertext entries bounded while preserving unique decoding. A worked example and preliminary statistical, entropy, avalanche, and timing results indicate that the proposed modular construction is computationally efficient and provides improved distributional behavior compared with standard monoalphabetic substitution.

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