A pair of simple closed curves on a closed and orientable surface of genus is called a filling pair if the complement is a disjoint union of topological disks. If is separating, then we call it as separating filling pair. In this article, we find a necessary and sufficient condition for the existence of a separating filling pair on with exactly two complementary disks. We study the combinatorics of the action of the mapping class group on the set of such filling pairs. Furthermore, we construct a Morse function on the moduli space which, for a given hyperbolic surface , outputs the length of shortest such filling pair with respect to the metric in . We show that the cardinality of the set of global minima of the function is the same as the number of -orbits of such filling pairs.

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