Quarkonium production has been studied extensively in relativistic heavy-ion collision experiments to understand the properties of the quark gluon plasma. The experimental results on the yield modification in heavy-ion collisions relative to that in + collisions can be described by several models considering dissociation and regeneration effects. A yield modification beyond initial-state effects has also been observed in small collision systems such as +Au and +Pb collisions, but it is still premature to claim any hot medium effect. A model study in various small collision systems such as +, +Pb, +O, and O+O collisions will help quantitatively understanding nuclear effects on the production. A theoretical calculation considering the gluo-dissociation and inelastic parton scattering and their inverse reaction reasonably describes the suppression of in Pb+Pb collisions. Based on this calculation, a Monte-Carlo simulation is developed to more realistically incorporate the medium produced in heavy-ion collisions with event-by-event initial collision geometry and hydrodynamic evolution. We extend this framework to small systems to study the medium effects. In this work, we quantify the nuclear modification factor of as a function of charged particle multiplicity () and transverse momentum. We also calculate the elliptic flow of in small collision systems.

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