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A Rota-Baxter algebra is an algebra equipped with a distinguished Rota-Baxter operator on it. Rota-Baxter algebras are closely related to dendriform algebras introduced by Loday. In this paper, we first consider the non-abelian extension theory of Rota-Baxter algebras and classify them by introducing the non-abelian cohomology. Next, given a non-abelian extension of Rota-Baxter algebras, we construct the Wells type exact sequences and find their role in extending a Rota-Baxter automorphism and lifting a Rota-Baxter automorphism to an automorphism in . We end this paper by considering a similar study for dendriform algebras.

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