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This paper develops the theory of Macdonald-Koornwinder polynomials in parallel analogy with the work done for the case in [CR22]. In the context of the type affine root system the Macdonald polynomials of other root systems of classical type are specializations of the Koornwinder polynomials. We derive -function formulas for symmetrizers and use them to give -expansions, principal specializations and norm formulas for bosonic, mesonic and fermionic Koornwinder polynomials. Finally, we explain the proof of the norm conjectures and constant term conjectures for the Koornwinder case.

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