We propose a formal extension of thermodynamics and kinetic theories to a
larger class of entropy functionals. Kinetic equations associated to Boltzmann,
Fermi, Bose and Tsallis entropies are recovered as a special case. This
formalism first provides a unifying description of classical and quantum
kinetic theories. On the other hand, a generalized thermodynamical framework is
justified to describe complex systems exhibiting anomalous diffusion. Finally,
a notion of generalized thermodynamics emerges in the context of the the
violent relaxation of collisionless stellar systems and two-dimensional
vortices due to the existence of Casimir invariants and incomplete relaxation.
A thermodynamical analogy can also be developed to analyze the nonlinear
dynamical stability of stationary solutions of the Vlasov and 2D Euler-Poisson
systems. On general grounds, we suggest that generalized entropies arise due to
the existence of hidden constraints'' that modify the form of entropy that we would naively expect. Generalized kinetic equations are therefore effective’’
equations that are introduced heuristically to describe complex systems.

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