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We describe the homology intersection form associated to regular holonomic GKZ systems in terms of the combinatorics of regular triangulations. Combining this result with the twisted period relation, we obtain a formula of cohomology intersection numbers in terms of a Laurent series. We show that the cohomology intersection number depends rationally on the parameters. We also prove a conjecture of F. Beukers and C. Verschoor on the signature of the monodromy invariant hermitian form. This is a continuation of the previous work arXiv:1904.00565.

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