In this article, we study the Bruhat-Chevalley-Renner order on the complex
symplectic monoid . After showing that this order is completely
determined by the Bruhat-Chevalley-Renner order on the linear algebraic monoid
of matrices , we focus on the Borel submonoid of . By
using this submonoid, we introduce a new set of type B set partitions. We
determine their count by using the folding'' and unfolding’’ operators that
we introduce. We show that the Borel submonoid of a rationally smooth reductive
monoid with zero is rationally smooth. Finally, we analyze the nilpotent
subsemigroups of the Borel semigroups of and . We show that,
contrary to the case of , the nilpotent subsemigroup of the Borel
submonoid of is irreducible.

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