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We discuss the flavor structure in a resolutions of magnetized orbifold models. The flavor structure of Yukawa couplings among chiral zero-modes is sensitive to radii of the resolved fixed points of orbifold. We show in concrete models that the realistic mass hierarchy and mixing angles of the quark sector can be realized at certain values of blow-up radii, where the number of parameters in the blow-up model can be smaller than toroidal orbifold one.

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