We study the evolution of averaged transconductances in three-terminal Josephson junctions when the superconducting leads are led throughout a topological phase transition from an -wave to a -wave (Majorana) phase by an in-plane magnetic field . We provide a complete description of this transition as a function of and a magnetic flux threading the junction. For that we use a spinful model within a formalism that allows to treat on equal footing the contribution to the transconductance from both the Andreev subgap levels and the continuum spectrum. We unveil a fractionalization in the quantization of the transconductance due to the presence of Majorana quasiparticles, reflecting the effective pumping of half a Cooper pair charge in the -wave regime.

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