We investigate the scaling limit of the seed bank diffusion when reproduction
and migration (to and from the seed bank) happen on different time-scales. More
precisely, we consider the case when migration is slow' and reproduction is standard’ (in the original time-scale) and then switch to a new, accelerated
time-scale, where migration is standard' and reproduction is fast’. This is
motivated by models for bacterial dormancy, where periods of quiescence can be
orders of magnitude larger than reproductive times, and where it is expected to
find non-trivial degenerate genealogies on the evolutionary time-scale.
However, the above scaling regime is not only interesting from a biological
perspective, but also from a mathematical point of view, since it provides a
prototypical example where the expected scaling limit of a continuous diffusion
should (and will be) a jump-diffusion. For this situation, standard convergence
results often seem to fail in multiple ways. For example, since the set of
continuous paths from a closed subset of the c`adl`ag paths in each of the
classical Skorohod topologies and , none of them can be
employed for tightness on path-space. Further, a na"ive direct rescaling of
the Markov generator corresponding to the continuous diffusion immediately
leads to a blow-up of the diffusion coefficient. Still, one can identify a
well-defined limit via duality in a surprisingly non-technical way. Indeed, we
show that a certain duality relation is in some sense stable under passage to
the limit and allows an identification of the limit, avoiding all
technicalities related to the blow-up in the classical generator. The result
then boils down to a convergence criterion for time-continuous Markov chains in
a separation of time-scales regime, which is of independent interest.

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