We study mirror symmetry on the singular locus of the Hitchin system at two levels. Firstly, by covering it by (supports of) -branes, corresponding to Higgs bundles reducing their structure group to the Levi subgroup of some parabolic subgroup , whose conjectural dual -branes we describe. Heuristically speaking, the latter are given by Higgs bundles reducing their structure group to the unipotent radical of . Secondly, when is a Borel subgroup, we are able to construct a family of hyperholomorphic bundles on the -brane, and study the variation of the dual under this choice. We give evidence of both families of branes being dual under mirror symmetry via an integral functor induced by Fourier-Mukai in the moduli stack of Higgs bundles.

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