The charge transfer compound (BEDT-TTF)Ag(CF)(TCE) crystallizes in three polymorphs with different alternating layers: While a phase with a packing motif has a low superconducting transition temperature of K, two phases with higher of and K are multi-layered structures consisting of and layers. We investigate these three systems within density functional theory and find that the layer shows different degrees of charge order for the two - systems and directly influences the electronic behavior of the conducting layer. We discuss the origin of the distinct behavior of the three polymorphs and propose a minimal tight-binding Hamiltonian for the description of these systems based on projective molecular Wannier functions.

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