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We examine matter induced CPT violation effects in long baseline electron neutrino appearance experiments in a low energy neutrino factory setup. Assuming CPT invariance in vacuum, the magnitude of CPT violating asymmetry in matter has been estimated using the exact expressions for the transition probabilities. The dependence of the asymmetry on the oscillation parameters like mixing angles, mass squared differences as well as on the Dirac CP violating phase has been investigated.

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