We present a Kedlaya-style point counting algorithm for cyclic covers $y^r = f(x)_{p^n}prr\deg{f}$ not necessarily coprime. This algorithm generalizes the Gaudry-G"urel algorithm for superelliptic curves to a more general class of curves, and has essentially the same complexity. Our practical improvements include a simplified algorithm exploiting the automorphism of , refined bounds on the -adic precision, and an alternative pseudo-basis for the Monsky-Washnitzer cohomology which leads to an integral matrix when $p \geq 2r$. Each of these improvements can also be applied to the original Gaudry-G"urel algorithm. We include some experimental results, applying our algorithm to compute Weil polynomials of some large genus cyclic covers.

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