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A chirally-motivated coupled-channel potential, reproducing all low-energy experimental data on scattering and kaonic hydrogen and suitable for using in accurate few-body calculations, was constructed. The potential was used for calculations of low-energy amplitudes of the elastic scattering using Faddeev-type AGS equations with coupled and channels. A complex potential reproducing the three-body amplitudes was constructed and used for calculation of level shift and width of kaonic deuterium. The predicted shift $\Delta E_{1s}^{K^- d} \sim -830\Gamma_{1s}^{K^- d} \sim 1055$ eV are close to our previous results obtained with phenomenological potentials.

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