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We extend the adiabatic limit formula for eta-invariants by Bismut-Cheeger and Dai to Seifert fibrations. Our formula contains a new contribution from the singular fibres that takes the form of a generalised Dedekind sum. As an application, we compute the Eells-Kuiper and t-invariants of certain cohomogeneity one manifolds that were studied by Dearricott, Grove, Verdiani, Wilking, and Ziller. In particular, we determine the diffeomorphism type of a new manifold of positive sectional curvature.

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