We investigate the Dolbeault operator on a pair of pants, i.e., an elementary cobordism between a circle and the disjoint union of two circles. This operator induces a canonical selfadjoint Dirac operator on each regular level set of a fixed Morse function defining this cobordism. We show that as we approach the critical level set from above and from below these operators converge in the gap topology to (different) selfadjoint operators that we describe explicitly. We also relate the Atiyah-Patodi-Singer index of the Dolbeault operator on the cobordism to the spectral flows of the operators on the complement of and the Kashiwara-Wall index of a triplet of finite dimensional lagrangian spaces canonically determined by .

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