This paper develops an embedded-hybridized discontinuous Galerkin (E-HDG) method combined with a first-order implicit-explicit scalar auxiliary variable (IMEX-SAV) time discretization for variational initial-state data assimilation governed by the unsteady incompressible Navier-Stokes equations. We adopt an optimize-then-discretize strategy. The spatial discretization uses discontinuous piecewise polynomials of degrees and for the element velocity and pressure, respectively, a continuous degree- velocity trace, and a discontinuous degree- pressure trace. The resulting state and adjoint velocities, as well as the reconstructed initial velocity, are globally divergence-free. The forward IMEX-SAV state scheme is unconditionally energy stable. Under suitable regularity and local-trajectory assumptions whose bounds introduce no explicit negative powers of the viscosity, the mesh-dependent condition , and a contractivity condition on the Tikhonov parameter, we establish local existence and uniqueness of the fully discrete OTD optimality system and Reynolds-semi-robust error estimates of order for the state, adjoint and reconstructed initial velocities; the constants contain no explicit negative powers of the viscosity. Numerical experiments confirm convergence on smooth tests and demonstrate machine-precision discrete incompressibility, effective nonlinear-solver behavior, and stable performance in small-viscosity regimes.

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